You can filter the time data in WinMLS. If your active plot type is a time domain plot type (Time Data, Integrated Time Data, Energy-Time Curve or Schroeder Curve) this can be turned on from Plot->Plot Type Settings->Active Plot… as shown in the figure below
Make sure the check box is checked. Click the button to display the dialog box shown below where you can select the filter frequency.
Note: A faster way of filtering is to use the Active Plot Type Toolbar. The buttons can be used to shift the filter frequency up and down and to access the filter settings.